TF binding site predictions - JASPAR CORE collection (2018)

These data are the basis of the JASPAR UCSC track hub, but can also be used independently. Detailed information at and the track hub help page.


We provide predictions for the following species and genomes:

Species Genome assembly versions
Human hg19, hg38
Drosophila melanogaster dm6
Caenorhabditis elegans ce10
Arabidopsis thaliana araTha1
Saccharomyces cerevisiae sacCer3


A Khan, O Fornes, A Stigliani, A Bessy, M Gheorghe, R van der Lee, J A Castro-Mondragon, J Cheneby, S R Kulkarni, G Tan, D Baranasic, D J Arenillas, A Sandelin, K Vandepoele, B Lenhard, B Ballester, W W Wasserman, F Parcy, A Mathelier. JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Accepted by Nucleic Acids Research. 2018.

[ICO]NameLast modifiedSizeDescription

[DIR]Parent Directory  -  
[DIR]araTha1/01-Nov-2017 17:29 -  
[DIR]ce10/01-Nov-2017 10:31 -  
[DIR]dm6/01-Nov-2017 13:33 -  
[DIR]hg19/02-Nov-2017 15:08 -  
[DIR]hg38/02-Nov-2017 15:07 -  
[TXT]readme02-Nov-2017 16:37 2.5K 
[DIR]sacCer3/01-Nov-2017 13:55 -  

Apache/2.2.15 (CentOS) Server at Port 80