TF binding site predictions - JASPAR CORE collection (2018)

These data are the basis of the JASPAR UCSC track hub, but can also be used independently. Detailed information at http://jaspar.genereg.net/genome-tracks/ and the track hub help page.

Genomes

We provide predictions for the following species and genomes:

Species Genome assembly versions
Human hg19, hg38
Drosophila melanogaster dm6
Caenorhabditis elegans ce10
Arabidopsis thaliana araTha1
Saccharomyces cerevisiae sacCer3

Citation

A Khan, O Fornes, A Stigliani, A Bessy, M Gheorghe, R van der Lee, J A Castro-Mondragon, J Cheneby, S R Kulkarni, G Tan, D Baranasic, D J Arenillas, A Sandelin, K Vandepoele, B Lenhard, B Ballester, W W Wasserman, F Parcy, A Mathelier. JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Accepted by Nucleic Acids Research. 2018.


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[DIR]araTha1/01-Nov-2017 17:29 -  
[DIR]ce10/01-Nov-2017 10:31 -  
[DIR]dm6/01-Nov-2017 13:33 -  
[DIR]hg19/02-Nov-2017 15:08 -  
[DIR]hg38/02-Nov-2017 15:07 -  
[TXT]readme02-Nov-2017 16:37 2.5K 
[DIR]sacCer3/01-Nov-2017 13:55 -  

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