TF binding site predictions - JASPAR CORE collection (2018)

These data are the basis of the JASPAR UCSC track hub, but can also be used independently. Detailed information at http://jaspar.genereg.net/genome-tracks/ and the track hub help page.

Genomes

We provide predictions for the following species and genomes:

Organism Genome Assembly
Human hg19, hg38
Mus musculus mm10
Danio rerio danRer10
Drosophila melanogaster dm6
Caenorhabditis elegans ce10
Arabidopsis thaliana araTha1
Saccharomyces cerevisiae sacCer3

Citation

A Khan, O Fornes, A Stigliani, A Bessy, M Gheorghe, R van der Lee, J A Castro-Mondragon, J Cheneby, S R Kulkarni, G Tan, D Baranasic, D J Arenillas, A Sandelin, K Vandepoele, B Lenhard, B Ballester, W W Wasserman, F Parcy, A Mathelier. JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Research. 2018. PMID 29140473


[ICO]NameLast modifiedSizeDescription

[DIR]Parent Directory  -  
[DIR]ce10/01-Nov-2017 10:31 -  
[DIR]dm6/01-Nov-2017 13:33 -  
[DIR]sacCer3/01-Nov-2017 13:55 -  
[DIR]danRer10/12-Jan-2018 08:18 -  
[DIR]araTha1/12-Jan-2018 08:57 -  
[DIR]mm10/16-Jan-2018 09:49 -  
[DIR]hg38/16-Jan-2018 10:43 -  
[DIR]hg19/16-Jan-2018 10:44 -  
[TXT]readme15-Mar-2018 11:04 2.7K 

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