TF binding site predictions - JASPAR CORE collection (2018)

These data are the basis of the JASPAR UCSC track hub, but can also be used independently. Detailed information at and the track hub help page.


We provide predictions for the following species and genomes:

Organism Genome Assembly
Human hg19, hg38
Mus musculus mm10
Danio rerio danRer10
Drosophila melanogaster dm6
Caenorhabditis elegans ce10
Arabidopsis thaliana araTha1
Saccharomyces cerevisiae sacCer3


A Khan, O Fornes, A Stigliani, A Bessy, M Gheorghe, R van der Lee, J A Castro-Mondragon, J Cheneby, S R Kulkarni, G Tan, D Baranasic, D J Arenillas, A Sandelin, K Vandepoele, B Lenhard, B Ballester, W W Wasserman, F Parcy, A Mathelier. JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Research. 2018. PMID 29140473

[ICO]NameLast modifiedSizeDescription

[DIR]Parent Directory  -  
[DIR]araTha1/12-Jan-2018 08:57 -  
[DIR]ce10/01-Nov-2017 10:31 -  
[DIR]danRer10/12-Jan-2018 08:18 -  
[DIR]dm6/01-Nov-2017 13:33 -  
[DIR]hg19/16-Jan-2018 10:44 -  
[DIR]hg38/16-Jan-2018 10:43 -  
[DIR]mm10/16-Jan-2018 09:49 -  
[DIR]sacCer3/01-Nov-2017 13:55 -  
[TXT]readme15-Mar-2018 11:04 2.7K 

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